Function which saves the raw and significant version of the differential gene expression data for a specific differential gene expression experiment within a timeseries object
create_DE_data_results(object, DE_type, exp_name, save_location)
A timeseries object
Character for the type of differential gene expression containing the experiment of interest (conditional or temporal)
Character stating the name of the differential gene expression of interest
Character the location where the csv files will be saved.
None
TS_object<-create_example_object_for_R()
TS_object <- normalize_timeSeries_with_deseq2(time_object=TS_object)
#> converting counts to integer mode
#Perform conditional differential gene expression analysis
TS_object<-conditional_DE_wrapper(TS_object,vignette_run=TRUE)
#Below function will save results to main directory
my_res<-create_DE_data_results(TS_object,DE_type='conditional',exp_name='IgM_vs_LPS_TP_1',save_location=NULL)