Function which saves the raw and significant version of the differential gene expression data for a specific differential gene expression experiment within a timeseries object

create_DE_data_results(object, DE_type, exp_name, save_location)

Arguments

object

A timeseries object

DE_type

Character for the type of differential gene expression containing the experiment of interest (conditional or temporal)

exp_name

Character stating the name of the differential gene expression of interest

save_location

Character the location where the csv files will be saved.

Value

None

Examples

TS_object<-create_example_object_for_R()
TS_object <- normalize_timeSeries_with_deseq2(time_object=TS_object)
#> converting counts to integer mode
#Perform conditional differential gene expression analysis
TS_object<-conditional_DE_wrapper(TS_object,vignette_run=TRUE)
#Below function will save results to main directory
my_res<-create_DE_data_results(TS_object,DE_type='conditional',exp_name='IgM_vs_LPS_TP_1',save_location=NULL)