Creates a table which summariezes the conditional and temporal differetial gene expression results. The table shows the number of significant DEGs found in each differential gene experiment performed. The table is created for a Rmarkdown format report
create_DEG_df(time_object)The DEG table summarizing the results
TS_object<-create_example_object_for_R()
TS_object <- normalize_timeSeries_with_deseq2(time_object=TS_object)
#> converting counts to integer mode
#Perform conditional differential gene expression analysis
TS_object<-conditional_DE_wrapper(TS_object,vignette_run=TRUE)
TS_object<-temporal_DE_wrapper(TS_object,do_all_combinations=FALSE,vignette_run=TRUE)
DEG_df<-create_DEG_df(TS_object)