Creates differential expression results for Vignettes — DE_plots

The function will generate two summary heatmaps of the differential gene expression results. The function was originally written to be used in Vignettes. Full sets of differential gene expression results can be obtained with the plot_wrapper_DE_results function

DE_plots_vignettes(object)

Arguments

object: A timeseries object

Value

list of heatmaps (contains conditional and temporal plot)

Examples

TS_object<-create_example_object_for_R()
TS_object <- normalize_timeSeries_with_deseq2(time_object=TS_object)
#> converting counts to integer mode
#Perform conditional differential gene expression analysis
TS_object<-conditional_DE_wrapper(TS_object,vignette_run=TRUE)
TS_object<-temporal_DE_wrapper(TS_object,vignette_run=TRUE)
plot_list<-DE_plots_vignettes(TS_object)